# Single molecule tracking test

graphics opengl_good

dim 2

boundaries 0 0 20 r
boundaries 1 0 20 r

time_start 0
time_stop 100
time_step 0.001

species receptor ligand bound

difc ligand 1

color receptor red
color ligand green
color bound yellow
display_size all(all) 0.3

reaction rxn1 receptor + ligand -> bound 3
reaction_serialnum rxn1 r2
reaction_log stdout rxn1 1

reaction rxn2 bound -> receptor + ligand 1
reaction_serialnum rxn2 new + r1
reaction_log stdout rxn2 1

mol 1 ligand u u
mol 50 receptor u u

cmd B echo stdout "listmols:\n"
cmd B listmols stdout

cmd N 100 trackmol 1 stdout


end_file