# Simulation of adsorption to a membrane
# Units are microns and seconds

define XHI 1
define YHI 0.5
define ZHI 0.5
define NMOL 200

graphics opengl_good
graphic_iter 1

dim 3
names A
max_mol 1000

difc A(solution) 1
color A(all) 0 0 0
display_size A(all) 0.01

time_start 0
time_stop 500
time_step 0.001

boundaries 0 0 XHI
boundaries 1 0 YHI
boundaries 2 0 ZHI

boxsize 0.2

max_surface 2

start_surface
name walls
action both all reflect
color both 0 0 0
polygon both edge
max_panels rect 5
panel rect -0 XHI 0 0 YHI ZHI
panel rect +1 0 0 0 XHI ZHI
panel rect -1 0 YHI 0 XHI ZHI
panel rect +2 0 0 0 XHI YHI
panel rect -2 0 0 ZHI XHI YHI
end_surface

start_surface
name stick
rate A fsoln up 0.5
color both 0.5 0.5 0.5 0.8
max_panels rect 1
panel rect +0 0 0 0 YHI ZHI
end_surface

mol NMOL A u u u

end_file