# Simulation file of basic diffusion and reaction
# This file is used to test output files

graphics opengl
graphic_iter 1
accuracy 5

dim 3
species red blue
max_mol 1000
molperbox 4

time_start 0
time_stop 100
time_step 0.1

output_root cmdfileoutput/
output_files cmdfileout.txt
output_file_number cmdfileout.txt 1

cmd n 100 incrementfile cmdfileout.txt
cmd e molcount cmdfileout.txt

difc red 1
difc blue 1
color red 1 0 0
color blue 0 0 1

boundaries 0 0 100 r
boundaries 1 0 100 r
boundaries 2 0 100 r

mol 100 red u u u
mol 1 blue 50 50 50

reaction rxn red -> 0 0.1

end_file